BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033H01SP1|AL429811
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1044 1660 0.0
>3x_Contig1044
Length = 4552
Score = 1660 bits (832), Expect = 0.0
Identities = 847/856 (98%), Gaps = 1/856 (0%)
Strand = Plus / Plus
Query: 1 caacacagtattaatggagttcatcaccctaacgttaaaggtctctcacatgtaataaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 caacacagtattaatggagttcatcaccctaacgttaaaggtctctcacatgtaataaag 1482
Query: 61 ttgacgaaacgaacgcatatgtccaattatttcccccaaaatgatgaacttcacaggatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1483 ttgacgaaacgaacgcatatgtccaattatttcccccaaaatgatgaacttcacaggatc 1542
Query: 121 aaattctttctcaggtctatcttccatggaagttttcgcagaagcaatataaaaygaagc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1543 aaattctttctcaggtctatcttccatggaagttttcgcagaagcaatataaaatgaagc 1602
Query: 181 cacttttactaacaagatcaaatcgattcgttgatattatttgagtagggtagagttaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1603 cacttttactaacaagatcaaatcgattcgttgatattatttgagtagggtagagttaga 1662
Query: 241 accaagaccgtcaagcgtgcctccaaggctttgattgamaagtactatccaaagttgacc 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1663 accaagaccgtcaagcgtgcctccaaggctttgattgaaaagtactatccaaagttgacc 1722
Query: 301 atggatttccaaaccaacaagagattgtgtgacgaaatcgctaccatccaatctaagaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1723 atggatttccaaaccaacaagagattgtgtgacgaaatcgctaccatccaatctaagaga 1782
Query: 361 ttgagaaacaagattgcyggttacaccacccatttgatgaagagaatccaaaagcggtcc 420
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1783 ttgagaaacaagattgctggttacaccacccatttgatgaagagaatccaaaag-ggtcc 1841
Query: 421 agttagaggtatttccttcaagttgcaagaagaagaaagagaaagaaaggmtcaatacgt 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1842 agttagaggtatttccttcaagttgcaagaagaagaaagagaaagaaaggatcaatacgt 1901
Query: 481 tccagatgtctctgctttggacttgtctcactctaacgacgtcttgaacgttgacactca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1902 tccagatgtctctgctttggacttgtctcactctaacgacgtcttgaacgttgacactca 1961
Query: 541 aaccgctgaattggtcaactctttgggtttgaagttgccattatccgtttcctctgtttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1962 aaccgctgaattggtcaactctttgggtttgaagttgccattatccgtttcctctgtttc 2021
Query: 601 tgctgtyagagacagaagattcagaaaaagaaactaagcmattatcatctagaaaacttt 660
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2022 tgctgttagagacagaagattcagaaaaagaaactaagcaattatcatctagaaaacttt 2081
Query: 661 agttaataataammagatgtaccatcctttttatttcttttgtatatgattctacagttg 720
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2082 agttaataataaaaagatgtaccatcctttttatttcttttgtatatgattctacagttg 2141
Query: 721 cttgtttaaatctttaatcatcggtattcgatcattgttgtaaatccgtcattttagtcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2142 cttgtttaaatctttaatcatcggtattcgatcattgttgtaaatccgtcattttagtcg 2201
Query: 781 gagctgtatgagaagctaatactaattttccccataaacttcattaatagaagatccgta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2202 gagctgtatgagaagctaatactaattttccccataaacttcattaatagaagatccgta 2261
Query: 841 aatataacataaacat 856
||||||||||||||||
Sbjct: 2262 aatataacataaacat 2277
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7846
Number of Sequences: 1807
Number of extensions: 7846
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)